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Comparative analysis of targeted long read sequencing approaches for characte...
The Oxford Nanopore Technologies MinION™ sequencer is a small, portable, low cost device that is accessible to labs of all sizes and attractive for in-the-field sequencing... -
Transcriptomic and metabolic responses of Calotropis procera to salt and drou...
Calotropis procera is a wild plant species in the family Apocynaceae that is able to grow in harsh, arid and heat stressed conditions. Understanding how this highly adapted... -
Aequatus: an open-source homology browser
Phylogenetic information inferred from the study of homologous genes helps us to understand the evolution of genes and gene families, including the identification of ancestral... -
LC3-Associated Phagocytosis Is Required for Dendritic Cell Inflammatory Cytok...
The human fungal microbiota known as mycobiota is increasingly recognized as a critical factor in human gut health and disease. Nonpathogenic commensal yeasts such as... -
A gene expression signature in developing Purkinje cells predicts autism and ...
Autism spectrum disorder (ASD) is a complex neurodevelopmental disease whose underpinning molecular mechanisms and neural substrates are subject to intense scrutiny.... -
ReGaTE: Registration of Galaxy Tools in Elixir
Bioinformaticians routinely use multiple software tools and data sources in their day-to-day work and have been guided in their choices by a number of cataloguing initiatives.... -
Introducing the Brassica Information Portal: Towards integrating genotypic an...
The Brassica Information Portal (BIP) is a centralised repository for Brassica phenotypic data. Trait data associated with Brassica research and breeding experiments conducted... -
Coordination of robust single cell rhythms in the Arabidopsis circadian clock...
The Arabidopsis circadian clock orchestrates gene regulation across the day/night cycle. Although a multiple feedback loop circuit has been shown to generate the 24-hr rhythm,... -
Dominant integration locus drives continuous diversification of plant immune ...
The plant immune system is innate and encoded in the germline. Using it efficiently, plants are capable of recognizing a diverse range of rapidly evolving pathogens. A recently... -
microRNAs associated with early neural crest development in Xenopus laevis
The neural crest (NC) is a class of transitory stem cell-like cells unique to vertebrate embryos. NC cells arise within the dorsal neural tube where they undergo an epithelial... -
Leaf-GP: an open and automated software application for measuring growth phen...
Background Plants demonstrate dynamic growth phenotypes that are determined by genetic and environmental factors. Phenotypic analysis of growth features over time is a key... -
The Structure of a Conserved Telomeric Region Associated with Variant Antigen...
African trypanosomiasis is a vector-borne disease of humans and livestock caused by African trypanosomes (Trypanosoma spp.). Survival in the vertebrate bloodstream depends on... -
An Alternative Strategy for Trypanosome Survival in the Mammalian Bloodstream...
There are hundreds of Trypanosoma species that live in the blood and tissue spaces of their vertebrate hosts. The vast majority of these do not have the ornate system of... -
Transcriptomic analysis of salt stress responsive genes in Rhazya stricta
Rhazya stricta is an evergreen shrub that is widely distributed across Western and South Asia, and like many other members of the Apocynaceae produces monoterpene indole... -
The first near-complete assembly of the hexaploid bread wheat genome, Triticu...
Common bread wheat, Triticum aestivum, has one of the most complex genomes known to science, with 6 copies of each chromosome, enormous numbers of near-identical sequences... -
Genome-Wide Transcription During Early Wheat Meiosis Is Independent of Synaps...
Polyploidization is a fundamental process in plant evolution. One of the biggest challenges faced by a new polyploid is meiosis, particularly discriminating between multiple... -
Convergent evolution of SWS2 opsin facilitates adaptive radiation of threespi...
Repeated adaptation to a new environment often leads to convergent phenotypic changes whose underlying genetic mechanisms are rarely known. Here, we study adaptation of color... -
Efficient and accurate detection of splice junctions from RNA-seq with Portcu...
Next-generation sequencing technologies enable rapid and cheap genome-wide transcriptome analysis, providing vital information about gene structure, transcript expression, and... -
Integrative analysis of Paneth cell proteomic and transcriptomic data from in...
Paneth cells are key epithelial cells that provide an antimicrobial barrier and maintain integrity of the small-intestinal stem cell niche. Paneth cell abnormalities are... -
Genome sequencing of the staple food crop white Guinea yam enables the develo...
Root and tuber crops are a major food source in tropical Africa. Among these crops are several species in the monocotyledonous genus Dioscorea collectively known as yam, a...